If the bus has been wrecked and repaired, the windshield may not fit correctly due to a poorly repaired mask.. may be correct on one plane, but off fore and aft...or some such combination. If the roof has been raised, the upper outside corner may be pulled back, or displaced forward slightly.
When replacing the rubber, or whenever the windshield is removed, check the dimensions of the windshield mask. As Marc states, the hole is probably not a good fit.
Tricky part would be setting up a jig to verify the fore and aft planes. The vertical and lateral planes would be easy to assess.
IMHO, the windshield has mounting issues. Bus windshields don't pop out when correctly installed in a proper fitting mask.
Marc's comment about MC9s not being especially airtight....is correct...they aren't. Unless the fresh air inlets are covered and sealed, the bus cannot build interior pressure, or draw a vacuum. MC9s have ample areas for "pressure relief" in the drivers compartment too.
Good luck, JR
BTW, if you pressurize the coach in order to assess for leaks...be ready to catch your windshield....may pop out while pressurized.